Indigenous Gene Editing Technology to Aid Cheaper, Commercial Crop Breeding

Syllabus: GS3/Science and Technology

In News

  • Indian scientists at ICAR’s Central Rice Research Institute have developed a patented indigenous Genome-Editing(GE) technology using TnpB proteins as a compact alternative to the globally patented CRISPR-Cas systems. 
Do you know?
– In May 2025, ICAR released two genome-edited rice varieties developed by  Indian Institute of Rice Research (IIRR) and the Indian Agricultural Research Institute (IARI)
– IIRR enhanced yields in Samba Mahsuri rice by editing the cytokinin oxidase 2 gene using CRISPR-Cas12a, while IARI improved drought and salinity tolerance in MTU-1010 (Cottondora Sannalu) by editing the DST gene with CRISPR-Cas9.
– Despite these advances, commercial cultivation faces hurdles due to intellectual property restrictions on CRISPR-Cas technologies.

TnpB or Transposon-associated proteins

  • It acts as “molecular scissors,”  and precisely cuts and modifies plant DNA, enabling desirable traits without introducing foreign genes.
  • Unlike bulky Cas9 and Cas12a proteins, the hypercompact TnpB (408 amino acids) can be easily delivered into cells via viral vectors, bypassing tissue culture methods. 
  • ICAR secured a 20-year Indian patent in September 2025 and has filed for international protection, with adoption by plant breeders seen as the next critical step.

 Features

  • It has smaller proteins compared to CRISPR-Cas, reducing complexity and cost.
  • It enables targeted DNA cuts and modifications for crop improvement.
  • It reduces dependence on foreign proprietary technologies.
  • It is designed for commercial application in crop breeding programs.

 Benefits

  • It cuts down licensing and royalty costs associated with foreign technologies.
    • It is seen as a potential game-changer because CRISPR-Cas tools are heavily patented by the Broad Institute and Corteva, which may impose license fees on commercial cultivation of genome-edited (GE) crops.
      • Indigenous tools could eliminate these IP barriers.
  • It has the potential to deliver high-yield, climate-resilient, and pest-resistant varieties at lower costs.
  • It strengthens India’s position in the $165.7 billion bioeconomy, projected to reach $300 billion by 2030.
  • It enhances India’s ability to meet rising food demand sustainably.
  • It positions India as a leader in affordable GE crop technologies.

 Challenges

  • India’s GE crops face strict biosafety and approval hurdles under the Plant Variety and Farmers’ Rights Protection Authority Act.
  • Concerns around GM/GE crops persist among consumers and activists.
  • Infrastructure Gaps: Need for advanced labs, trained personnel, and seed distribution networks.

Way Ahead

  • India’s indigenous gene-editing technology offers a cost-effective alternative to global platforms, with the potential to democratize access to GE crops, enhance food security, and empower farmers. 
  • To fully realize its promise, there is a need for  streamlining regulatory approvals while safeguarding biosafety and farmer rights.
  • There is a need for building public trust through awareness, integrating efforts with national bioeconomy and innovation missions, fostering international collaboration.

Sources:IE

 

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